| 2013 | Biocatalytic synthesis of pikromycin, methymycin, neomethymycin, novamethymycin, and ketomethymycin | 윤여준 | Article |
| 2007 | Bioconversion of 12-, 14-, and 16-membered ring aglycones to glycosylated macrolides in an engineered strain of Streptomyces venezuelae | 윤여준 | Article |
| 2011 | Biosynthesis of glycosylated derivatives of tylosin in Streptomyces venezuelae | 윤여준; 박제원 | Article |
| 2010 | Biosynthesis of plant-specific flavones and flavonols in Streptomyces venezuelae | 윤여준; 박제원 | Article |
| 2010 | Biosynthesis of rapamycin and its regulation: Past achievements and recent progress | 윤여준 | Review |
| 2011 | Biosynthesis of the allylmalonyl-CoA extender unit for the FK506 polyketide synthase proceeds through a dedicated polyketide synthase and facilitates the mutasynthesis of analogues | 윤여준; 이상기 | Article |
| 2017 | Biosynthetic pathways of aminoglycosides and their engineering | 윤여준; 남상집; 차선신; 반연희 | Review |
| 2014 | Biotransformation of rosamicin antibiotic into 10,11-dihydrorosamicin with enhanced in vitro antibacterial activity against MRSA | 윤여준 | Article |
| 2019 | Camporidines A and B: Antimetastatic and Anti-inflammatory Polyketide Alkaloids from a Gut Bacterium of Camponotus kiusiuensis | 윤여준; 반연희 | Article |
| 2014 | Characterization and engineering of the ethylmalonyl-CoA pathway towards the improved heterologous production of polyketides in Streptomyces venezuelae | 윤여준 | Article |
| 2011 | Characterization and identification of pradimicin analogs from Actinomadura hibisca using liquid chromatography-tandem mass spectrometry | 윤여준 | Article |
| 2013 | Characterization of FK506 biosynthetic intermediates involved in post-PKS elaboration | 윤여준; 송명종; Pramod B. Shinde | Article |
| 2014 | Characterization of negative regulatory genes for the biosynthesis of rapamycin in Streptomyces rapamycinicus and its application for improved production | 윤여준 | Article |
| 2013 | Combinatorial biosynthesis and antibacterial evaluation of glycosylated derivatives of 12-membered macrolide antibiotic YC-17 | 윤여준; Pramod B. Shinde | Article |
| 2008 | Combinatorial biosynthesis of 5-O-desosaminyl erythronolide A as a potent precursor of ketolide antibiotics | 윤여준 | Article |
| 2021 | Corrigendum: “Approximated expression of the hygroscopic growth factor for polydispersed aerosols” (Journal of Aerosol Science (2021) 151, (S0021850220301567), (10.1016/j.jaerosci.2020.105670)) | 이지이 | Erratum |
| 2006 | Degradation of clavulanic acid during the cultivation of Streptomyces clavuligerus; instability of clavulanic acid by metabolites and proteins from the strain | 윤여준 | Article |
| 2018 | Depsidomycins B and C: New cyclic peptides from a ginseng farm soil-derived actinomycete | 윤여준; 송명종 | Article |
| 2013 | Designed biosynthesis of 36-methyl-FK506 by polyketide precursor pathway engineering | 윤여준 | Article |
| 2011 | Development of a Streptomyces venezuelae-based combinatorial biosynthetic system for the production of glycosylated derivatives of doxorubicin and its biosynthetic intermediates | 윤여준; 박제원 | Article |
| 2004 | Development of modified stokes expression to model the behavior of expanded beds containing polydisperse resins for protein adsorption | 윤여준 | Article |
| 2007 | Discovery and molecular engineering of sugar-containing natural product biosynthetic pathways in actinomycetes | 윤여준; 모상준 | Review |
| 2011 | Discovery of parallel pathways of kanamycin biosynthesis allows antibiotic manipulation | 윤여준 | Article |
| 2021 | Dumulmycin, an antitubercular bicyclic macrolide from a riverine sediment-derived streptomyces sp. | 남상집 | Article |
| 2014 | Egr-1 activation by cancer-derived extracellular vesicles promotes endothelial cell migration via ERK1/2 and JNK signaling pathways | 김윤근 | Article |
| 2017 | Enabling techniques in the search for new antibiotics: Combinatorial biosynthesis of sugar-containing antibiotics | 윤여준; 남상집 | Review |
| 2012 | Engineered biosynthesis of glycosylated derivatives of narbomycin and evaluation of their antibacterial activities | 윤여준; Pramod B. Shinde | Article |
| 2009 | Engineering of plant-specific phenylpropanoids biosynthesis in Streptomyces venezuelae | 윤여준 | Article |
| 2009 | Enhanced FK506 production in Streptomyces clavuligerus CKD1119 by engineering the supply of methylmalonyl-CoA precursor | 윤여준; 박제원 | Article |
| 2011 | Enhanced flavonoid production in Streptomyces venezuelae via metabolic engineering | 윤여준 | Article |
