Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | 이상혁 | * |
dc.date.accessioned | 2018-05-02T08:15:35Z | - |
dc.date.available | 2018-05-02T08:15:35Z | - |
dc.date.issued | 2004 | * |
dc.identifier.issn | 0305-1048 | * |
dc.identifier.other | OAK-2231 | * |
dc.identifier.uri | https://dspace.ewha.ac.kr/handle/2015.oak/242743 | - |
dc.description.abstract | Alternative splicing is in important mechanism of modulating gene function and expression which greatly expands transcriptome diversity. ASmodeler is a novel web-based utility that finds gene models including alternative splicing events from genomic alignment of mRNA, EST and protein sequences. User-supplied sequences are aligned against the genome map using the BLAT and SIM4 programs. Resulting exon connectivity is analyzed by applying graph-theoretic methods to build all possible gene models including splice variants. The algorithm essentially combines the genome-based sequence clustering and transcript assembly procedures in a coherent fashion. In addition to the user-supplied sequences, UniGene clusters and many well-known gene predictions such as Genscan, Ensembl and Acembly may be included in gene modeling. The current implementation supports human, mouse and rat genomes. ASmodeler is available at http://genome.ewha.ac.kr/ECgene/ASmodeler/. © Oxford University Press 2004; all rights reserved. | * |
dc.language | English | * |
dc.title | ASmodeler: Gene modeling of alternative splicing from genomic alignment of mRNA, EST and protein sequences | * |
dc.type | Article | * |
dc.relation.issue | WEB SERVER ISS. | * |
dc.relation.volume | 32 | * |
dc.relation.index | SCI | * |
dc.relation.index | SCIE | * |
dc.relation.index | SCOPUS | * |
dc.relation.startpage | W181 | * |
dc.relation.lastpage | W186 | * |
dc.relation.journaltitle | Nucleic Acids Research | * |
dc.identifier.doi | 10.1093/nar/gkh404 | * |
dc.identifier.wosid | WOS:000222273100038 | * |
dc.identifier.scopusid | 2-s2.0-3242892447 | * |
dc.author.google | Kim N. | * |
dc.author.google | Shin S. | * |
dc.author.google | Lee S. | * |
dc.contributor.scopusid | 이상혁(57212112170) | * |
dc.date.modifydate | 20240415122632 | * |