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IdBean: A java GUI application for conversion of biological identifiers

Title
IdBean: A java GUI application for conversion of biological identifiers
Authors
Lee S.Kim B.Kim H.Lee H.Yu U.
Ewha Authors
이상혁
SCOPUS Author ID
이상혁scopus
Issue Date
2011
Journal Title
BMB Reports
ISSN
1976-6696JCR Link
Citation
vol. 44, no. 2, pp. 107 - 112
Indexed
SCIE; SCOPUS; KCI WOS scopus
Abstract
We have developed a biologist-friendly, stand-alone Java GUI application, IdBean, for ID conversion. Our tool integrated most of the widely used ID conversion services that provide programmatic access. It is the first GUI ID conversion application that supports the direct merging as well as comparison of conversion results from multiple ID conversion services without manual effort. This tool will greatly help biologists who handle multiple ID types for the analyses of gene or gene product lists. By referring to multiple conversion services, the number of failed IDs can be reduced. By accessing ID conversion service online, it will potentially provide the most up-to-date conversion results. The application was developed in modular form; however, it can be re-packaged into plug-in form. For the development of a bioinformatics analysis tool, the module can be used as a built-in ID conversion component. It is available at http://neon.gachon.ac.kr/IdBean/.
DOI
10.5483/BMBRep.2011.44.2.107
Appears in Collections:
자연과학대학 > 생명과학전공 > Journal papers
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