| 1998 | Phylogenetic Analysis and E1 Gene Expression of Rubella Viruses Isolated in Korea | 김세연 | Master's Thesis |
| 2012 | Phylogenetic analysis of human bocavirus in hospitalized children with acute respiratory tract infection in Korea | 안종균 | Article |
| 2015 | Phylogenetic Analysis of Severe Fever with Thrombocytopenia Syndrome Virus in South Korea and Migratory Bird Routes between China, South Korea, and Japan | 윤여준 | Article |
| 2017 | Phylogenetic analysis of two Plectus mitochondrial genomes (Nematoda: Plectida) supports a sister group relationship between Plectida and Rhabditida within Chromadorea | 김유섭; 박중기 | Article |
| 2011 | Phylogenetic and conservation status of the endangered terrestrial orchid Nervilia nipponica (Orchidaceae) in Korea | 이남숙 | Article |
| 2008 | Phylogenetic characterization of two novel commensal bacteria involved with innate immune homeostasis in Drosophila melanogaster | 이원재 | Article |
| 2000 | Phylogenetic relationships of bioleaching-associated bacteria for the establishment of genetic marker | 이혜원 | Master's Thesis |
| 2006 | Phylogenetic relationships within Cicuta (Apiaceae tribe Oenantheae) inferred from nuclear rDNA ITS and cpDNA sequence data | 이창숙 | Article |
| 2006 | Phylogenetic relationships within the genus Atopobathynella Schminke (Bathynellacea : Parabathynellidae) | 이상돈 | Article |
| 2003 | Phylogenetic status of Oreorchis coreana Finet(Orchidaceae) implied by morphological and molecular data | 엄상미 | Master's Thesis |
| 2008 | Phylogeny and biogeography of apiaceae tribe oenantheae inferred from nuclear rdna its and cpdna psbi-5'trnK(uuu) sequences, with emphasis on the north american endemics clade | 이창숙 | Article |
| 2007 | Phylogeny and comparative seed morphology of epiphytic and terrestrial species of Liparis (Orchidaceae) in Japan | 이남숙 | Article |
| 2014 | Phylogeny of Rhigonematomorpha based on the complete mitochondrial genome of Rhigonema thysanophora (Nematoda: Chromadorea) | 박중기 | Article |
| 2018 | Phylogeny, Marker development, and Physiological activities of Veratrum album complex (Melanthiaceae) in Korea and adjacent regions | 김진옥 | Doctoral Thesis |
| 2017 | Phylogeographic and population insights of the Asian common toad (Bufo gargarizans) in Korea and China: Population isolation and expansions as response to the ice ages | 장이권 | Article |
| 2019 | Phylogeographic studies on two shore crab species from East Asia: similar but different stories | 정종우 | Article |
| 2021 | Phylogeography of Mytilisepta virgata (Mytilidae: Bivalvia) in the northwestern Pacific: Cryptic mitochondrial lineages and mito-nuclear discordance | 김유섭; 박중기; Elizabeth Mary Anna Hassell | Article |
| 2019 | Phylogeography of the highly invasive sugar beet nematode, Heterodera schachtii (Schmidt, 1871), based on microsatellites | 박중기; Gang Ni | Article |
| 2015 | Phylogeography of the rock shell Thais clavigera (Mollusca): Evidence for long-distance dispersal in the northwestern Pacific | 박중기 | Article |
| 2015 | Phylogeography of the Rock Shell Thais clavigera (Mollusca): Evidence for Long-Distance Dispersal in the Northwestern Pacific (vol 10, e0129715, 2015) | 박중기 | Correction |
