| 2014 | 2-Cys peroxiredoxins: Emerging hubs determining redox dependency of mammalian signaling networks | 이상혁; 강상원 | Review |
| 2013 | A High-Dimensional, Deep-Sequencing Study of Lung Adenocarcinoma in Female Never-Smokers | 이상혁; 김재상; 김완규; 정연주 | Article |
| 2015 | A highly recurrent novel missense mutation in CD28 among angioimmunoblastic T-cell lymphoma patients | 이상혁; 김재상 | Letter |
| 2018 | A Novel Drug Screening Method based on Large-scale Bioactivity Dataset | 권예지 | Doctoral Thesis |
| 2011 | A p53/miRNA-34 axis regulates Snail1-dependent cancer cell epithelial-mesenchymal transition | 이상혁 | Article |
| 2014 | A recurrent inactivating mutation in RHOA GTPase in angioimmunoblastic T cell lymphoma | 이상혁; 김재상; 김완규 | Article |
| 2012 | A simplified homology-model builder toward highly protein-like structures: An inspection of restraining potentials | 이상혁 | Article |
| 2011 | Accurate quantification of transcriptome from RNA-Seq data by effective length normalization | 이상혁 | Article |
| 2018 | An integrated clinical and genomic information system for cancer precision medicine | 이상혁; 서지혜 | Article |
| 2019 | An Integrative Data Mining and Omics-Based Translational Model for the Identification and Validation of Oncogenic Biomarkers of Pancreatic Cancer | 이상혁 | Article |
| 1999 | An NMR study on the conformation of naphthalene-viologen linked compounds: Effect of flexible spacer length | 박준우; 이상혁 | Article |
| 2014 | Analyses of Compound Set using Structural Scaffold and Target Information | 류한나 | Master's Thesis |
| 2020 | Angioimmunoblastic T-cell lymphoma-like lymphadenopathy in mice transgenic for human RHOA with p.Gly17Val mutation | 이상혁; 김재상; 이대기 | Article |
| 2005 | ASePCR: Alternative splicing electronic RT-PCR in multiple tissues and organs | 이상혁 | Article |
| 2004 | ASmodeler: Gene modeling of alternative splicing from genomic alignment of mRNA, EST and protein sequences | 이상혁 | Article |
| 2012 | Association of diseases and chemicals by gene set analysis for drug repositioning | 박혜린 | Master's Thesis |
| 2006 | Bayesian hierarchical models for serial analysis of gene expression | 이상혁 | Conference Paper |
| 2022 | Bioinformatics analysis of cellular heterogeneity at the single-cell level | 조수빈 | Doctoral Thesis |
| 2020 | Bioinformatics services for analyzing massive genomic datasets | 이상혁 | Article |
| 2019 | CaPSSA: visual evaluation of cancer biomarker genes for patient stratification and survival analysis using mutation and expression data | 이상혁; 서지혜 | Article |
| 2017 | Characterization of developmental defects in the forebrain resulting from hyperactivated mTOR signaling by integrative analysis of transcriptomic and proteomic data | 이상혁; 김재상 | Article |
| 2015 | Characterization of SLC22A18 as a tumor suppressor and novel biomarker in colorectal cancer | 이상혁; 김재상; 정연주 | Article |
| 2020 | Characterization of TNNC1 as a Novel Tumor Suppressor of Lung Adenocarcinoma | 이상혁; 김재상; 정연주 | Article |
| 2006 | ChimerDB - a knowledgebase for fusion sequences | 이상혁 | Article |
| 2010 | ChimerDB 2.0 A knowledgebase for fusion genes updated | 이상혁; 김재상 | Article |
| 2017 | ChimerDB 3.0 | 이명교 | Master's Thesis |
| 2017 | ChimerDB 3.0: An enhanced database for fusion genes from cancer transcriptome and literature data mining | 이상혁 | Article |
| 2020 | ChimerDB 4.0: an updated and expanded database of fusion genes | 이상혁; 김재상 | Article |
| 2006 | ChimerDB--a knowledgebase for fusion sequences. | 이상혁 | Article |
| 2011 | Clinical validation of colorectal cancer biomarkers identified from bioinformatics analysis of public expression data | 이상혁; 김재상; 김완규; 정연주 | Article |
