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Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood
- Title
- Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood
- Authors
- Lee, Hae-Won; Kim, Dae-Won; Lee, Mi-Hwa; Kim, Byung-Yong; Cho, Yong-Joon; Yim, Kyung June; Song, Hye Seon; Rhee, Jin-Kyu; Seo, Myung-Ji; Choi, Hak-Jong; Choi, Jong-Soon; Lee, Dong-Gi; Yoon, Changmann; Nam, Young-Do; Roh, Seong Woon
- Ewha Authors
- 이진규
- SCOPUS Author ID
- 이진규
- Issue Date
- 2015
- Journal Title
- STANDARDS IN GENOMIC SCIENCES
- ISSN
- 1944-3277
- Citation
- STANDARDS IN GENOMIC SCIENCES vol. 10
- Keywords
- Extremely halophilic archaea; Haladaptatus cibarius; Genome sequence; Salt-fermented seafood; Glycine betaine; Trehalose
- Publisher
- BIOMED CENTRAL LTD
- Indexed
- SCIE; SCOPUS
- Document Type
- Article
- Abstract
- An extremely halophilic archaeon, Haladaptatus cibarius D43(T), was isolated from traditional Korean salt-rich fermented seafood. Strain D43(T) shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28(T), is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43(T). The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G + C content of 57.76 %.
- DOI
- 10.1186/s40793-015-0051-8
- Appears in Collections:
- 공과대학 > 식품생명공학과 > Journal papers
- Files in This Item:
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