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Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood

Title
Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood
Authors
Lee, Hae-WonKim, Dae-WonLee, Mi-HwaKim, Byung-YongCho, Yong-JoonYim, Kyung JuneSong, Hye SeonRhee, Jin-KyuSeo, Myung-JiChoi, Hak-JongChoi, Jong-SoonLee, Dong-GiYoon, ChangmannNam, Young-DoRoh, Seong Woon
Ewha Authors
이진규
SCOPUS Author ID
이진규scopus
Issue Date
2015
Journal Title
STANDARDS IN GENOMIC SCIENCES
ISSN
1944-3277JCR Link
Citation
vol. 10
Keywords
Extremely halophilic archaeaHaladaptatus cibariusGenome sequenceSalt-fermented seafoodGlycine betaineTrehalose
Publisher
BIOMED CENTRAL LTD
Indexed
SCIE; SCOPUS WOS scopus
Abstract
An extremely halophilic archaeon, Haladaptatus cibarius D43(T), was isolated from traditional Korean salt-rich fermented seafood. Strain D43(T) shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28(T), is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43(T). The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G + C content of 57.76 %.
DOI
10.1186/s40793-015-0051-8
Appears in Collections:
엘텍공과대학 > 식품공학전공 > Journal papers
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