| 2013 | High genetic diversity within the morphologically conservative dwarf loach, Kichulchoia brevifasciata (Teleostei: Cobitidae), an endangered freshwater fish from South Korea | 원용진 | Article |
| 2013 | Identification of Cichlid Fishes from Lake Malawi Using Computer Vision | 원용진; 송종우 | Article |
| 2012 | Korea Barcode of Life Database System (KBOL) | 송준임; 원용진; 정종우 | Article |
| 2018 | Multi-locus phylogenetic analyses support the monophyly and the Miocene diversification of Iksookimia (Teleostei: Cypriniformes: Cobitidae) | 원용진 | Article |
| 2017 | Multiple modes of positive selection shaping the patterns of incomplete selective sweeps over african populations of drosophila melanogaster | 원용진; 김유섭 | Article |
| 2006 | Nuclear gene variation and molecular dating of the cichlid species flock of Lake Malawi | 원용진 | Article |
| 2005 | On the origin of Lake Malawi cichlid species: A population genetic analysis of divergence | 원용진 | Conference Paper |
| 2012 | Permanent genetic resources added to molecular ecology resources database 1 August 2011-30 September 2011 | 원용진 | Note |
| 2011 | Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2010-31 January 2011 | 원용진 | Article |
| 2010 | Permanent Genetic Resources added to Molecular Ecology Resources Database 1 October 2009-30 November 2009 | 원용진 | Article |
| 2016 | Population subdivision of hydrothermal vent polychaete Alvinella pompejana across equatorial and Easter Microplate boundaries | 원용진 | Article |
| 2015 | Postglacial range shift and demographic expansion of the marine intertidal snail Batillaria attramentaria | 원용진 | Article |
| 2015 | rpoB gene sequencing for phylogenetic analysis of avian pathogenic Escherichia coli | 원용진 | Article |
| 2011 | The complete mitochondrial genome of Calicogorgia granulosa (Anthozoa: Octocorallia): Potential gene novelty in unidentified ORFs formed by repeat expansion and segmental duplication | 송준임; 원용진 | Article |
