| 2016 | Complete mitochondrial genome of the headwater livebearer, Poeciliopsis monacha: the mother of clones | 원용진 | Article |
| 2022 | Connectivity and divergence of symbiotic bacteria of deep-sea hydrothermal vent mussels in relation to the structure and dynamics of mid-ocean ridges | 원용진 | Article |
| 2017 | Early life history of the eastern Korean tetraploid spined loach, lksookimia yongdokensis (Pisces: Cobitidae) | 원용진 | Article |
| 2018 | Exploring the Ecology of Deep-Sea Hydrothermal Vents in a Metacommunity Framework | 원용진 | Review |
| 2015 | First hydrothermal discoveries on the Australian-Antarctic Ridge: Discharge sites, plume chemistry, and vent organisms | 원용진 | Article |
| 2020 | Genetic patterns reveal northward range expansion and cryptic diversity in Nalbant's spined loach, Cobitis nalbanti sensu lato (Teleostei: Cypriniformes: Cobitidae) | 원용진 | Article |
| 2023 | Genome assembly of the Korean intertidal mud-creeper <i>Batillaria attramentaria</i> | 원용진; 김유섭 | Article; Data Paper |
| 2023 | Geographical subdivision of Alviniconcha snail populations in the Indian Ocean hydrothermal vent regions | 원용진 | Article |
| 2017 | Impact of human activities on changes of ichthyofauna in Dongjin River of Korea in the past 30 years | 원용진 | Article |
| 2019 | Impacts of Salt Stress on Locomotor and Transcriptomic Responses in the Intertidal Gastropod Batillaria attramentaria | 원용진; 박중기 | Article |
| 2021 | Locomotor responses to salt stress in native and invasive mud-tidal gastropod populations (Batillaria) | 원용진; Elizabeth Mary Anna Hassell | Article |
| 2017 | Small fishes crossed a large mountain range: Quaternary stream capture events and freshwater fishes on both sides of the Taebaek Mountains | 원용진 | Article |
| 2023 | Transcriptomic response to salinity variation in native and introduced mud-tidal gastropod <i>Batillaria attramentaria</i> | 원용진 | Article |
