| 2019 | CaPSSA: visual evaluation of cancer biomarker genes for patient stratification and survival analysis using mutation and expression data | 이상혁; 서지혜 | Article |
| 2017 | Characterization of developmental defects in the forebrain resulting from hyperactivated mTOR signaling by integrative analysis of transcriptomic and proteomic data | 이상혁; 김재상 | Article |
| 2015 | Characterization of SLC22A18 as a tumor suppressor and novel biomarker in colorectal cancer | 이상혁; 김재상; 정연주 | Article |
| 2020 | Characterization of TNNC1 as a Novel Tumor Suppressor of Lung Adenocarcinoma | 이상혁; 김재상; 정연주 | Article |
| 2006 | ChimerDB - a knowledgebase for fusion sequences | 이상혁 | Article |
| 2010 | ChimerDB 2.0 A knowledgebase for fusion genes updated | 이상혁; 김재상 | Article |
| 2017 | ChimerDB 3.0 | 이명교 | Master's Thesis |
| 2017 | ChimerDB 3.0: An enhanced database for fusion genes from cancer transcriptome and literature data mining | 이상혁 | Article |
| 2020 | ChimerDB 4.0: an updated and expanded database of fusion genes | 이상혁; 김재상 | Article |
| 2006 | ChimerDB--a knowledgebase for fusion sequences. | 이상혁 | Article |
| 2011 | Clinical validation of colorectal cancer biomarkers identified from bioinformatics analysis of public expression data | 이상혁; 김재상; 김완규; 정연주 | Article |
| 2007 | Clinical validity of the lung cancer biomarkers identified by bioinformatics analysis of public expression data | 이상혁; 김재상 | Article |
| 2014 | Compact variant-rich customized sequence database and a fast and sensitive database search for efficient proteogenomic analyses | 이상혁 | Article |
| 2000 | Complexation of naphthalene-viologen linked compounds with alpha-cyclodextrin: Effect of linkage length on thermodynamic parameters and complex structures | 박준우; 이상혁 | Article |
| 2022 | Comprehensive Analysis of Alternative Splicing in Gastric Cancer Identifies Epithelial-Mesenchymal Transition Subtypes Associated with Survival | 이상혁; Charles Lee | Article |
| 2001 | Conformation and binding properties of polymethylene-linked bisviologens-2-naphthol complexes | 박준우; 이종목; 이상혁 | Article |
| 2023 | Conserved miR-370-3p/BMP-7 axis regulates the phenotypic change of human vascular smooth muscle cells | 이상혁; 강상원; 김재상; 이두재; 정연주 | Article |
| 2005 | Construction of ECgene Portal Site and Microarray Data Analysis for Alternative Splicing | 김보라 | Master's Thesis |
| 2015 | Cytosolic Hsp60 orchestrates the survival and inflammatory responses of vascular smooth muscle cells in injured aortic vessels | 이상혁; 강상원; 김재상; 이두재; 정연주; 강동훈 | Article |
| 2015 | Data-driven drug discovery by chemical genomics approaches | 이해승 | Doctoral Thesis |
| 2015 | Development of computational methods for identifying cancer biomarkers from high-throughput data | 전유경 | Doctoral Thesis |
| 2013 | Development of web applications for fusion gene and post-GWAS analyses | 윤서연 | Doctoral Thesis |
| 2022 | Direct cell-to-cell transfer in stressed tumor microenvironment aggravates tumorigenic or metastatic potential in pancreatic cancer | 이상혁; 김재상; Charles Lee; 장기용; 이지은 | Article |
| 2012 | Discovery of ALK-PTPN3 gene fusion from human non-small cell lung carcinoma cell line using next generation RNA sequencing | 이상혁; 김재상; 정연주 | Article |
| 2006 | Down-regulation of Sox10 with specific small interfering RNA promotes transdifferentiation of Schwannoma cells into myofibroblasts | 이상혁; 김재상; 임진경 | Article |
| 2020 | Earlier-Phased Cancer Immunity Cycle Strongly Influences Cancer Immunity in Operable Never-Smoker Lung Adenocarcinoma | 이상혁; 정연주 | Article |
| 2007 | ECgene: An alternative splicing database update | 이상혁; 김재상 | Article |
| 2005 | ECgene: Genome annotation for alternative splicing | 이상혁 | Article |
| 2005 | ECgene: Genome-based EST clustering and gene modeling for alternative splicing | 이상혁 | Article |
| 2021 | Elucidating molecular mechanisms of acquired resistance to BRAF inhibitors in melanoma using a microfluidic device and deep sequencing | 이상혁; 정연주 | Article |
